Integrated M.S./Ph.D. student at Yonsei University College of Medicine, Seoul. I study cancer through whole-genome sequencing: somatic and germline variation, tumor evolution, and mutation timing. On the side, I build small tools that automate the research workflow with LLM agents.
Whole-genome pipelines for somatic and germline variation.
Tools I fork and use for tumor evolution and long-read work: PhylogicNDT · MutationTimeR · gritic · Evolution (PCAWG) · pacsomatic (PacBio HiFi, Nextflow)
All cancer genomics repositories
LLM agents that automate parts of the research workflow.
All research agent repositories
Single-cell and spatial omics, multimodal integration with WGS, and deep learning with PyTorch.