Skip to content
Navigation Menu
Sign in
Products
Platform
GitHub
Repository hosting, code review, and collaboration
Copilot
AI coding agent for tasks, projects, and automated work
Build & Ship
Actions
CI/CD and automation
Code Quality
Quality analysis, fixes, and enforcement
Codespaces
Cloud development environments
Secure
Code Security
Vulnerability detection and remediation
Secret Protection
Secret scanning and leak prevention
All Features
Developers
Learn
Documentation
Training
Certifications
Build
Build with Copilot
Customize Copilot
Integrations
Explore
Trending repos
GitHub Sponsors
Developer articles
Changelog
Changelog
Your source for the latest features, improvements, and fixes across GitHub products, all in one place.
Businesses
By Stage
Enterprises
Team
Startups
Nonprofits
By Industry
Healthcare
Financial services
Manufacturing
Government
See all industries
Evaluate GitHub
Why GitHub
Customer Stories
Business insights
Trust Center
Add-ons
GitHub Advanced Security
Enterprise-grade code security
Copilot for business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Resources
Learn & Connect
Documentation
Resource center
Blog
Events & webinars
Community Forum
Customer Stories
Integrations
Support
Customer support
Training
GitHub Status
Company
About
Partners
Changelog
GitHub Universe
GitHub Universe
The event for developers, by developers — talks, workshops, and what’s next for GitHub.
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
cleme
qiime_test_data
Repository navigation
Code
Pull requests
Actions
Projects
Wiki
Security and quality
Insights
More
items
qiime_test_data
Public
forked from
caporaso-lab-graveyard/qiime_test_data
Notifications
You must be signed in to change notification settings
Fork
0
(
0
)
Star
0
(
0
)
You must be signed in to star a repository
About
Test input and output for QIIME scripts.
Resources
Readme
Activity
Stars
0
stars
Watchers
1
watching
Forks
0
forks
Report repository
master
Branches
Tags
Go to file
Code
Open more actions menu
Latest commit
History
58 Commits
58 Commits
Folders and files
Name
Name
Last commit message
Last commit date
add_taxa
add_taxa
adjust_seq_orientation
adjust_seq_orientation
alpha_diversity
alpha_diversity
alpha_rarefaction
alpha_rarefaction
beta_diversity
beta_diversity
beta_diversity_through_plots
beta_diversity_through_plots
beta_significance
beta_significance
compare_taxa_summaries
compare_taxa_summaries
compute_core_microbiome
compute_core_microbiome
conditional_uncovered_probability
conditional_uncovered_probability
convert_otu_table_to_unifrac_sample_mapping
convert_otu_table_to_unifrac_sample_mapping
convert_unifrac_sample_mapping_to_otu_table
convert_unifrac_sample_mapping_to_otu_table
core_qiime_analyses
core_qiime_analyses
filter_fasta
filter_fasta
filter_otus_from_otu_table
filter_otus_from_otu_table
filter_samples_from_otu_table
filter_samples_from_otu_table
jackknifed_beta_diversity
jackknifed_beta_diversity
make_distance_boxplots
make_distance_boxplots
make_distance_comparison_plots
make_distance_comparison_plots
make_otu_heatmap_html
make_otu_heatmap_html
make_otu_network
make_otu_network
make_otu_table
make_otu_table
make_tep
make_tep
map_reads_to_reference
map_reads_to_reference
merge_otu_tables
merge_otu_tables
multiple_rarefactions
multiple_rarefactions
multiple_rarefactions_even_depth
multiple_rarefactions_even_depth
otu_category_significance
otu_category_significance
parallel_align_seqs_pynast
parallel_align_seqs_pynast
parallel_alpha_diversity
parallel_alpha_diversity
parallel_assign_taxonomy_blast
parallel_assign_taxonomy_blast
parallel_assign_taxonomy_rdp
parallel_assign_taxonomy_rdp
parallel_beta_diversity
parallel_beta_diversity
parallel_blast
parallel_blast
parallel_identify_chimeric_seqs
parallel_identify_chimeric_seqs
parallel_map_reads_to_reference
parallel_map_reads_to_reference
parallel_multiple_rarefactions
parallel_multiple_rarefactions
parallel_pick_otus_blast
parallel_pick_otus_blast
parallel_pick_otus_trie
parallel_pick_otus_trie
parallel_pick_otus_uclust_ref
parallel_pick_otus_uclust_ref
per_library_stats
per_library_stats
pick_otus_through_otu_table
pick_otus_through_otu_table
pick_reference_otus_through_otu_table
pick_reference_otus_through_otu_table
pick_subsampled_reference_otus_through_otu_table
pick_subsampled_reference_otus_through_otu_table
plot_rank_abundance_graph
plot_rank_abundance_graph
shared_phylotypes
shared_phylotypes
simsam
simsam
single_rarefaction
single_rarefaction
sort_otu_table
sort_otu_table
split_libraries_fastq
split_libraries_fastq
split_otu_table
split_otu_table
split_otu_table_by_taxonomy
split_otu_table_by_taxonomy
start_parallel_jobs
start_parallel_jobs
summarize_otu_by_cat
summarize_otu_by_cat
summarize_taxa
summarize_taxa
summarize_taxa_through_plots
summarize_taxa_through_plots
supervised_learning
supervised_learning
transform_coordinate_matrices
transform_coordinate_matrices
trflp_file_to_otu_table
trflp_file_to_otu_table
README.md
README.md
script_usage_tests.py
script_usage_tests.py
View all files
Repository files navigation
README
More
items
qiime_test_data
Test input and output for QIIME scripts.
About
Test input and output for QIIME scripts.
Resources
Readme
Activity
Stars
0
stars
Watchers
1
watching
Forks
0
forks
Report repository
Releases
Packages
Contributors
Languages
You can’t perform that action at this time.
